PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI25767.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 109aa    MW: 11559.7 Da    PI: 9.3784
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI25767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA32.62.6e-101203958
   CBFB_NFYA 39 lheSRhkhAlrRpRgsgGrF 58
                +heSRh hAlrRpRg+gGrF
  MCI25767.1  1 MHESRHLHALRRPRGCGGRF 20
                7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MHESRHLHAL RRPRGCGGRF LNTKKSASGD DKAGSKVHKF GGQQLQCSGS QSSELLESDV  60
GTLNSSKETN GSSPNISGSE VTSLYSRGNL DGFNINNLGS NVHSLANMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34720.17e-13NF-YA family protein