PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI26025.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 167aa    MW: 18650.6 Da    PI: 5.0516
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI26025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.93.1e-072361554
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++N++f  Lr ++P+       K++Ka+ L  A+ YI++L
  MCI26025.1  2 KLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 36
                89*************6.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
EKLNQRFYAL RAVVPNVSKM DKASLLGDAI SYINELKSKL QGLESSKGEL EKQLDTTKKE  60
LELASKNPNP IPLDEEIEKT SSKLIDLEID VKIXXXXXXX XXXXXXXXXX XXKLMAALKE  120
LDLEVNHASV SVVNDLMIQQ ASVNMGSRFY TKEQLSSALS SKIGDAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17880.11e-53bHLH family protein