PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI26154.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 154aa    MW: 17525.9 Da    PI: 9.9738
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI26154.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.9e-122321446
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
       MCI26154.1  2 QAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 32
                     79*******.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRL SQNVYRRMDQ  60
NPSFICKDTT TTTMETESSS PYFLNGAPLG NSMSIFPYAT SFQHGVHGGG VDYGLNILPH  120
MSGEREAMKG PLHVGLYAQQ APFDFFSGLC PFSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14550YRRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.18e-29MYB family protein