PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI26244.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family S1Fa-like
Protein Properties Length: 180aa    MW: 19217.7 Da    PI: 6.5207
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI26244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA23.89.1e-08140175641
        S1FA   6 veakGlnPGlivllvvgglllvflvgnyilyvyaqk 41 
                   +kGl PGli+l+  + ++ v lvg  i+yvy +k
  MCI26244.1 140 NRSKGLSPGLIILISAADVVGVALVGLVIVYVYWKK 175
                 568******************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
EQIQRLILAR NKFSGEIPAG VWSELGNLIQ LDLSANDFKG PIPEDIGELH TLSGTLNLSF  60
NHLSGRIPNS LGKLSATVNF DLRNNNLIGE IPQTGTFSNQ GPTAFLGNKN LCGLPLRKSC  120
TGSDQGSGSD SSSRKDEPSN RSKGLSPGLI ILISAADVVG VALVGLVIVY VYWKKKDDDN