PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI26413.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 179aa    MW: 20476.1 Da    PI: 10.0314
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI26413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.21.2e-14489186
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrer.gferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                +Wt++e+ +L++a  ++  + +r++l+   W++v++k++e   +er+ +qC+++++ l+k+ykk k   ++   +  ++++yf++++
  MCI26413.1  4 EWTEKETFVLLDAWGDRFLQHGRKSLRSDEWQQVAEKVSEVsRVERTGTQCRNRLDTLKKKYKKDKIKFSEM-GGGDRKWVYFKKMD 89
                5*************************************775168*******************998887775.566679*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
SLTEWTEKET FVLLDAWGDR FLQHGRKSLR SDEWQQVAEK VSEVSRVERT GTQCRNRLDT  60
LKKKYKKDKI KFSEMGGGDR KWVYFKKMDK LMSSPPQQAG FSCGLDARES VLMKPRVYVN  120
HANGLDDMKD SPENTESVGV ESSDGPRAKK RRKGRSGGDD SSFKLLADSI QNFGKIYEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148154AKKRRKG
2149153KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.13e-42Trihelix family protein