PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI27287.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

SRS

Protein Properties

Length: 103aa MW: 10983.4 Da PI: 6.4969

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI27287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	72.2	1.5e-22	12	64	102	154
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++slP+ v+++avf+c rvs++ +ge+elaY ++v+i+GhvfkG+LydqG+++ MCI27287.1 12 KQSLPRYVRAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGIDA 64 467***********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence
MFGTGIADVS FKQSLPRYVR APAVFKCHRV SAIGNGEDEL AYLATVNISG HVFKGFLYDQ 60 GIDAKNETMP CVSELQLGSN GSGKSYKECS SAIEVPTSAY PAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	2e-21	SRS family protein