PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI27555.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 168aa    MW: 18718.5 Da    PI: 5.0673
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI27555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-191464256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  MCI27555.1 14 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 64
                59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MFRPQVQPIS TTKLYRGVRQ RHWGKWVAEI RLPRNRTRLW LGTFDTAEDA ALAYDREAFK  60
LRGENARLNF PELFLNKDKE KEKEKSAPSS PSPTTTAADS SVTSXTSNTV TKQPEPPPMQ  120
TLPIEESNEN DSGIGSSDAT VSEGGEGVSQ SQELVWSEMS AWFNAIPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-45ERF family protein