PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI27684.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family DBB
Protein Properties Length: 168aa    MW: 18554.4 Da    PI: 4.6219
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI27684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.23e-07141640
    zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                C+ +++  + l+C+ ++  lC +C  e H+       Ht++
  MCI27684.1  1 CDYCGHSTAVLYCRADSAKLCFSCDREVHSTnqlfskHTRS 41
                ******99*********************668888889876 PP
2zf-B_box26.11.7e-084285442
    zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                 +C+ +++ ++++ C + ++ +C++C  e H +      H+++pl
  MCI27684.1 42 LICDSCDDSPATILCSTESSVFCQNCDWENH-NlslsspHERRPL 85
                69*****************************.6688899988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
CDYCGHSTAV LYCRADSAKL CFSCDREVHS TNQLFSKHTR SLICDSCDDS PATILCSTES  60
SVFCQNCDWE NHNLSLSSPH ERRPLEGFTG CPSVTELLSI LGLQDIGKKS LLLPXXXXXX  120
GYVGYEIEGL SDLFVWDAPS FVSLDDLIST SPSSHNYRAM EVPPLPKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47890.23e-59DBB family protein