PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI27766.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

GeBP

Protein Properties

Length: 173aa MW: 18995.2 Da PI: 10.1561

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI27766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	83	4.2e-26	51	138	1	96
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki.W 96 k+f+r++seeDe+v+L+Glidf +ktgk+p ++i af++fvkks+++++s++q+ Kir LK+Kf+ sf+k+hd+++fel kki W MCI27766.1 51 KTFRRIFSEEDELVILKGLIDFISKTGKDPLKNIAAFHDFVKKSLHATASNQQIKRKIRGLKDKFESSD---------SFNKSHDKEAFELFKKIsW 138 579************************************************************8543.........689********999956 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
KKRAVDDNNA NGNASKRSKG KETVSAAAGG SGEENDDMEE DVRLTGDDSK KTFRRIFSEE 60 DELVILKGLI DFISKTGKDP LKNIAAFHDF VKKSLHATAS NQQIKRKIRG LKDKFESSDS 120 FNKSHDKEAF ELFKKISWGN NGGNVAGEEN GKAVNVKSPK KDVNVKVKHI GSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	3e-20	GeBP family protein