PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI27794.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

GRAS

Protein Properties

Length: 153aa MW: 17257.3 Da PI: 9.4463

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI27794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	144.6	9.7e-45	1	119	6	138
GRAS 6 lecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIle 104 ++cAeav++++l+ a+al++++ la ++ +m+++a+yf+e+La+r+++ + + s s++l++ f+e++P+lkf+h+taNqaIle MCI27794.1 1 MACAEAVEQNNLTVAEALVKQIGYLAVSQEGAMRKVATYFAEGLARRIYG----V-----FPQVS---ISDSLQI--HFYETCPYLKFAHFTANQAILE 85 68**********************************************....2.....22222...3444444..4***************** PP GRAS 105 avegeervHiiDfdisqGlQWpaLlqaLasRpeg 138 a++g++rvH+iDf+i+qG+QW+aL+qaLa Rp+ MCI27794.1 86 AFQGKSRVHVIDFSINQGMQWAALMQALALRPGC 119 *****************************953 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MACAEAVEQN NLTVAEALVK QIGYLAVSQE GAMRKVATYF AEGLARRIYG VFPQVSISDS 60 LQIHFYETCP YLKFAHFTAN QAILEAFQGK SRVHVIDFSI NQGMQWAALM QALALRPGCS 120 KKKKNLLYVL VVHLLFVSPE LVHRRLITPI IFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14920.1	3e-54	GRAS family protein