PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI27822.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LSD
Protein Properties Length: 49aa    MW: 5313.18 Da    PI: 4.5742
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI27822.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD149.85.6e-16832125
     zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                CggC+tlL+Y rGA+sV+C++C+tV
  MCI27822.1  8 CGGCHTLLMYIRGATSVQCSCCHTV 32
                ************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    
TEMAQLVCGG CHTLLMYIRG ATSVQCSCCH TVNLALEGCY LCTNMEQDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.32e-21LSD family protein