PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI27990.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 143aa    MW: 16197.6 Da    PI: 9.1832
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI27990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.72e-056688123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y C +CgksF  k + ++H +++
  MCI27990.1 66 YLCRKCGKSFAVKGDWRTHEKNC 88
                56*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MWGHGSQYRK GPDSLKGTQP TAMLRLPCFC CAPGCKHNID HPRAKPLKDF RTLQTHYKRK  60
HGIKPYLCRK CGKSFAVKGD WRTHEKNCGK IWYCLCGSDF KHKRSLKDHI KAFGYGHGAF  120
GIDCLQEEDE AGSEIEHDGG SSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.15e-89C2H2 family protein