PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28415.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family S1Fa-like
Protein Properties Length: 169aa    MW: 17815.6 Da    PI: 8.3563
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA22.13.2e-07539842
        S1FA  8 akGlnPGlivllvvgglllvflvgnyilyvyaqkn 42
                 kGl PGli+++ v+    v l+g  ++yvy +k+
  MCI28415.1  5 KKGLSPGLIIIITVADAAGVALIGLVVVYVYWKKK 39
                69*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
VNRSKKGLSP GLIIIITVAD AAGVALIGLV VVYVYWKKKD KSNGCSCTLK RKFGGSGNNE  60
RSHLCCFCWS LGCVKGFKSD DSEMEESEKG GGGGGGXXXG RGESEGEGEL VAIDKGFSFE  120
LDELLRASAY VLGKSGLGIV YKVVLGNGVP VAVRRLGEGG EQRYKEFAA