PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28478.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 102aa    MW: 11196.8 Da    PI: 6.2355
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS93.53.4e-29196120222
        GRAS 120 sqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesv 218
                 +qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fA++lg+pfef + va+++ ++++++L+v++ Ea+aV++    h+l+d ++
  MCI28478.1   1 MQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMETLEATGKRLSDFASKLGLPFEFFP-VAEKVGNIDPDKLNVSKSEAVAVHWLQ--HSLYDVTG 92 
                 69****************************....***************************.7************************99..88887777 PP

        GRAS 219 sles 222
                 s ++
  MCI28478.1  93 SDTN 96 
                 7766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MQGLQWPGLF HILASRPGGP PYVRLTGLGT SMETLEATGK RLSDFASKLG LPFEFFPVAE  60
KVGNIDPDKL NVSKSEAVAV HWLQHSLYDV TGSDTNTLWL LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.19e-60GRAS family protein