PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28518.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 168aa    MW: 19355.8 Da    PI: 9.0392
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.21e-132474087
    trihelix 40 ergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                e g++rs k+Ckek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  MCI28518.1  2 EFGYQRSGKKCKEKFENLYKYYKKTKEGKASR--QDGKHYRFFRQLEA 47
                669****************************8..55667*******85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
EEFGYQRSGK KCKEKFENLY KYYKKTKEGK ASRQDGKHYR FFRQLEAICG EASTSDKTTP  60
HVDAVVATQT PNFTINQENI NGVIXXXXXX XXXXXXXXXS FSNSSEFETS SSENNDEDLS  120
AIAHTMKTSK QKGVDKSDRR GRKSWRGKVE EIVDSHMKKI IETQDAWM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.12e-33Trihelix family protein