PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28657.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 168aa    MW: 18653.8 Da    PI: 6.5105
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS130.91.4e-40431682130
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 +++L+++Ae +++g+ ela+ +Larl+++ sp g+p+qR+a+yf+eAL + l++   ++ +  +  + s++    ++ a+k fse+sP+l+f+++t Nq
  MCI28657.1  43 IDQLFKAAELIDAGNPELAHGILARLNHQISPIGKPFQRAAFYFKEALLQLLQS---NVNNGNNNXNFSPTGLLLKIGAYKSFSEISPVLQFANFTSNQ 138
                 789**************************************************9...555555566666666*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlq 130
                 a+leaveg +r+HiiDfdi+ G+QW +++q
  MCI28657.1 139 ALLEAVEGYDRIHIIDFDIGFGGQWSSFMQ 168
                 *****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
QQQLQLLPHH LQQRSMAPKQ KMGNPGSGDG EDVSTHQFQQ AIIDQLFKAA ELIDAGNPEL  60
AHGILARLNH QISPIGKPFQ RAAFYFKEAL LQLLQSNVNN GNNNXNFSPT GLLLKIGAYK  120
SFSEISPVLQ FANFTSNQAL LEAVEGYDRI HIIDFDIGFG GQWSSFMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-36GRAS family protein