PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI28873.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

HSF

Protein Properties

Length: 53aa MW: 6227.06 Da PI: 10.5705

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI28873.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	25.2	4.2e-08	4	38	60	103
TTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 60 YgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103 +gF+k+++++ weF ++ F+kgkk+ll++i+r++s+ MCI28873.1 4 FGFRKIDTDK---------WEFFNEGFQKGKKHLLKNIQRRRSS 38 7888888777.........**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 53 aa Download sequence
MMCFGFRKID TDKWEFFNEG FQKGKKHLLK NIQRRRSSQP QQVGNYVGSS SDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-16	HSF family protein