PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI28993.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 149aa    MW: 17407.6 Da    PI: 8.236
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI28993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-3173128460
                 SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   4 gynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  ynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkver+  d++++ei+Y+g+Hnh+k
  MCI28993.1  73 XYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAP-DGHITEIIYKGQHNHDK 128
                 6**************************************.***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MHMQPEYQQV SLEPHTEQRV EQPSYTLSEA SEQQMVVHVS EPRNTQMETS EISHXXXXXX  60
XXXXXXXXXX XXXYNWRKYG QKQVKGSEYP RSYYKCTHLN CPVKKKVERA PDGHITEIIY  120
KGQHNHDKPQ ANKRAKENSD ANGNANVQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-32WRKY family protein