PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI29818.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HSF
Protein Properties Length: 79aa    MW: 9458.13 Da    PI: 5.7558
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI29818.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind71.91.3e-221573260
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
  HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                  Fl+k+y++++d+ +++++sws+++++fvv+ + efa+++Lp++Fk   f+SFvRQLn+Y
    MCI29818.1 15 FLTKTYQLVDDPLTDHIVSWSDDETTFVVWRPPEFARDLLPNFFKXXXFSSFVRQLNTY 73
                  9*********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MMFTMESQKS VPAPFLTKTY QLVDDPLTDH IVSWSDDETT FVVWRPPEFA RDLLPNFFKX  60
XXFSSFVRQL NTYVRIFKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.12e-37HSF family protein