PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI30007.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 144aa    MW: 16106.9 Da    PI: 10.9422
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI30007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-176294234
        GATA  2 snCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                s+C++ kTp+WR gp g ktLCnaCG++y++ +
  MCI30007.1 62 SHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 94
                69****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MKNRKPNPRV WALSPLLLRP FFPSPPPLVS GEPPAKKQKK KAQAQVGEVE AQDEXXXXXX  60
XSHCQVQKTP QWRTGPLGAK TLCNACGVRY KSGRLFSEYR PACSPTFSSE IHSNSHRKVL  120
EMRRRKGMVG PEPGLPAQTQ MVTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-37GATA family protein