PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI30508.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 129aa    MW: 14568.5 Da    PI: 9.8319
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI30508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.61.3e-2816661127
         NAM  61 FskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                 F+++d+ky++g+r nrat++gyWkatgkd++++s ++ l+g+kktLvfy+grapkg++t+Wvmheyr
  MCI30508.1   1 FCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKS-GNILIGMKKTLVFYSGRAPKGKRTNWVMHEYR 66 
                 99********************************.99*****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
FCPQDRKYPN GHRLNRATTH GYWKATGKDR RIKSGNILIG MKKTLVFYSG RAPKGKRTNW  60
VMHEYRPTLK ELDGTNPGQN PYVLCRLFKK NDESLEVSNC GEVEQATSAP LTANYSPEEI  120
QSDPAPITA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.15e-55NAC family protein