PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI30524.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 125aa    MW: 14168.8 Da    PI: 9.9675
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI30524.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA31.13.3e-10106125120
        GATA   1 CsnCgttkTplWRrgpdgnk 20 
                 Cs C+ttkTplWR+gp+g+k
  MCI30524.1 106 CSDCNTTKTPLWRSGPRGPK 125
                 ******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MVSSGSWDNN STAENHEIIK SKHKLTIRWK KEGINNNIEE VDHHDDGTSV KWMSSKMRMM  60
RKMIDSDQTS GSNIASNSKQ KFEDQKQPLS PLGSSTNNYS NQIRVCSDCN TTKTPLWRSG  120
PRGPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-12GATA family protein