PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31451.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 138aa    MW: 15251.4 Da    PI: 5.5685
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31451.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.53.4e-116793127
                --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                +kt+lC++f++   C++Gd+C++aH++
  MCI31451.1 67 WKTSLCSYFRKHASCSHGDTCRYAHSE 93
                8************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MAASAKLIEV LQTLSAQDST IESNPTAPQH AQIHELNDDV VTTEKRKRDD GBGNADADGK  60
PSLHPMWKTS LCSYFRKHAS CSHGDTCRYA HSEEELRQRP DNTWDPTSER GKKALKTVTG  120
EKIAVKDGVM MTELVGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28450.12e-26C3H family protein