PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI31453.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Trihelix

Protein Properties

Length: 141aa MW: 16293.5 Da PI: 9.7123

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI31453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	88.7	6.6e-28	26	109	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li +rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++ ++ s+s +++ +++++ MCI31453.1 26 WVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHQDRGGSGSG-KMSCYKEID 109 *********************************************************************966555.899999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MILAAESSGE DPEMEIKAPK KRAETWVQDE TRSLIGLRRE MDSLFNTSKS NKHLWEQISA 60 KMREKGFDRS PTMCTDKWRN LLKEFKKAKH HQDRGGSGSG KMSCYKEIDE ILRERSKCAQ 120 YKTLTPSSKV ESSYMHFADK G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.3	4e-67	Trihelix family protein