PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31520.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 130aa    MW: 13309.1 Da    PI: 8.7828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-054567123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C+ksF++   L  H r+H
  MCI31520.1 45 HECSICHKSFPTGQALGGHKRRH 67
                79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
LGGHKASHRK NSTAGTAGGD EQSTSSAATT SSANTAVGNG GVRSHECSIC HKSFPTGQAL  60
GGHKRRHYEG SVXGGGGGGG AATVSEVGST HXRDFDLNIP AFPEFGNKVG EDEVESPHPV  120
MMKKKPRVFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.11e-23C2H2 family protein