PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31727.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 124aa    MW: 14574.8 Da    PI: 8.9371
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM422.8e-1351192116
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 p G+ F Ptde lv +yL++k ++k    +  + i e+d+y ++P d+p +  +++ ++++ f++ + k      ++ r  ksg+  ++ + ++ +s +
  MCI31727.1   5 PLGVGFLPTDEILVGYYLANKNSEKVqvSNGYDLIIELDLYAYDPFDFPyTlFYYTIKNQLQFYCFTGKVD----EEMRHCKSGFRMKKKHVRDNTSVG 99 
                 78*******************9999855444578***************5353344456777777776654....567888899988888888888856 PP

         NAM  97 gelvglkktLvfykgrapkg 116
                 + +   k+ + fy g+ pk+
  MCI31727.1 100 NVVLEKKTLFNFYIGNFPKT 119
                 65555566668998877664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MYMRPLGVGF LPTDEILVGY YLANKNSEKV QVSNGYDLII ELDLYAYDPF DFPYTLFYYT  60
IKNQLQFYCF TGKVDEEMRH CKSGFRMKKK HVRDNTSVGN VVLEKKTLFN FYIGNFPKTA  120
SRTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.11e-08NAC family protein