PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31790.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 72aa    MW: 7980.12 Da    PI: 11.0151
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.25e-192371153
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                + y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l
  MCI31790.1 23 PVYRGVRRRS-NGKWVSEIREPK----KpNRIWLGTFPTPEMAAIAYDVAALAL 71
                68*****888.8*********94....468*********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MSENTTTYAS SSSSGKVLSG RHPVYRGVRR RSNGKWVSEI REPKKPNRIW LGTFPTPEMA  60
AIAYDVAALA LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-20ERF family protein