PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI31933.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family LBD
Protein Properties Length: 95aa    MW: 11020.5 Da    PI: 7.0962
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI31933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26040.39.3e-13693186
      DUF260  1 aCaaCkvlrr.kCakdCvlapyfpaeqpkkfanvhklFGasnvlk.llkal..peeeredamsslvyeAearardPvyGavgvilklqqq 86
                +C  C++ r+ +C+++C+ + yf +e   +f+ + ++FG +++   +l+al  + ee  + ++ +++eA+ + +d ++Ga+g++l++q++
  MCI31933.1  6 RCTPCRLTRKtGCNANCPTRIYFEDEL--DFRRIVHIFGYDHMRLwMLEALavSAEEGARCAQGIIWEANSKYHDHIHGAHGLFLNVQNE 93
                69********99**********97776..9***********99751566556577888999************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MANVERCTPC RLTRKTGCNA NCPTRIYFED ELDFRRIVHI FGYDHMRLWM LEALAVSAEE  60
GARCAQGIIW EANSKYHDHI HGAHGLFLNV QNERT