PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI32168.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 46aa    MW: 5248.9 Da    PI: 8.8842
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI32168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH40.74e-131842327
                S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  3 telCrffartGtCkyGdrCkFaHgp 27
                 ++C +++rtG+C yG+rC+F+H++
  MCI32168.1 18 VPNCAYYMRTGFCGYGGRCRFNHPR 42
                689********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    
MWHLTIGGGE SYPERHGVPN CAYYMRTGFC GYGGRCRFNH PRDRAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.22e-19C3H family protein