PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI32547.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 149aa    MW: 16751.2 Da    PI: 7.6689
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI32547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.63.2e-204911599
                -EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 15 rlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                 +++p k+a+ +        +++   +++l+++d +g++We+++ yr++++r+++t +W++Fv+ ++L  gD++vF+  ++s +e +v+++r 
  MCI32547.1  4 AFSVPSKCAKLIfppldleaKLP---TQELSITDVHGNVWEFRHVYRGNPKRHMFTHNWSQFVDKKKLVGGDSLVFM--KNSAGEIYVGIRRV 91
                57888888877788887653333...358************************************************..779********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
NGGAFSVPSK CAKLIFPPLD LEAKLPTQEL SITDVHGNVW EFRHVYRGNP KRHMFTHNWS  60
QFVDKKKLVG GDSLVFMKNS AGEIYVGIRR VKKFATPAVL QKNELVVIEA VKLADNNEAF  120
EVVYYPTIGD GDNFVVDANV VEDAMKINW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.11e-39ARF family protein