PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI32636.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 123aa    MW: 14006.2 Da    PI: 5.9854
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI32636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS155.35.6e-48212376202
        GRAS  76 eelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv 174
                 e+l+++++ ++++P++kf+h+taNqaI ea+e eervH+iD+di qG QWpa++qaLa+R++g+p lRiTgvg+      e+++etg+ L+++A++l++
  MCI32636.1   2 EVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGP----CIESVRETGRCLTELAHSLRI 96 
                 578999********************************************************************....********************* PP

        GRAS 175 pfefnvlvakrledleleeLrvkpgEal 202
                 pfef++ v ++ledl++++++ + gEal
  MCI32636.1  97 PFEFHP-VGEQLEDLKPHMFNRRVGEAL 123
                 ******.7************99999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MEVLKIYQIV YQACPYIKFA HFTANQAIFE AFEAEERVHV IDLDILQGYQ WPAFMQALAA  60
RSGGAPFLRI TGVGPCIESV RETGRCLTEL AHSLRIPFEF HPVGEQLEDL KPHMFNRRVG  120
EAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.16e-36GRAS family protein