PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI32851.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HD-ZIP
Protein Properties Length: 83aa    MW: 9946.39 Da    PI: 10.3621
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI32851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61e-182481056
                HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  MCI32851.1  2 EQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 48
                8*********************************************9 PP
2HD-ZIP_I/II125.72.1e-40282989
  HD-ZIP_I/II  9 eqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
                 eqvk+LE+sFe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+yd++k++n++L++++++L++
   MCI32851.1  2 EQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQYDSIKADNDALQAQNQKLQT 82
                 9******************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MEQVKTLEKS FELGNKLEPE RKMQLARALG LQPRQIAIWF QNRRARWKTK QLEKDYDVLK  60
RQYDSIKADN DALQAQNQKL QTE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14351RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-49HD-ZIP family protein