PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI33390.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 98aa    MW: 11127.5 Da    PI: 4.7392
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI33390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS50.15e-161184303374
        GRAS 303 aerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                 +++re +e +ekW er++eaGF    ++e+a +  ++llrk++ +++++veee+ + v l Wk++p+ ++S W+
  MCI33390.1  11 TNQREMNEGKEKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDnNWEMKVEEENSTTVgLWWKGQPVSFCSLWK 84 
                 5678999************************************9999******999999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MMEGEAAKAL TNQREMNEGK EKWCERMKEA GFAGEVFGED AIDGGRALLR KYDNNWEMKV  60
EEENSTTVGL WWKGQPVSFC SLWKLDKQSS SSSTLTAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-33GRAS family protein