PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI33549.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YB
Protein Properties Length: 129aa    MW: 14462 Da    PI: 4.6364
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI33549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB139.21.1e-431762297
       NF-YB 22 PanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                Panakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl++yre+egek
  MCI33549.1  1 PANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEK 76
                99************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
PANAKISKEA KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFENYVG  60
PLKVYLNNYR ETEGEKSNSS SMVTSTKQDD YDLNNSSIEV NHDVVVGGGF YSQVIDHAPK  120
RFQEINGAW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.14e-49NF-YB family protein