PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI33705.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

G2-like

Protein Properties

Length: 103aa MW: 11461.5 Da PI: 4.9438

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI33705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.4	1.8e-24	55	103	1	50
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHL 50 k+r++Wtp LH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHL MCI33705.1 55 KARVVWTPALHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHL 103 68*****************.*************************9 PP
2	Myb_DNA-binding	34.5	4.8e-11	57	103	1	44
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrw 44 r WT+ ++ ++v av+qlG + +k+I m+ +++t++++ s++ MCI33705.1 57 RVVWTPALHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHL 103 678******************************99******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence
PNSDSGNGID SALTGNSDQN DRPSSSRKRK EKNEDDVDEE NEDDHDNDDP TAQKKARVVW 60 TPALHRKFVA AVNQLGIDKA VPKKILDLMN VEKLTRENVA SHL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	32	RKRKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	6e-27	ARR-B family protein