PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI34543.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C3H
Protein Properties Length: 130aa    MW: 14185.6 Da    PI: 6.7841
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI34543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.84.2e-094164226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                + ++C +far G+Ck G++CkF Hg
  MCI34543.1 41 GFKPCLYFAR-GFCKNGSNCKFVHG 64
                5689******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MSLGAQNWIS GNNGDTHNIH RRSYSANDAS FGVEESGLGF GFKPCLYFAR GFCKNGSNCK  60
FVHGDSIDAN SAAIVGSPSK FEGLEQHEEF MRFKAAQHQR LVAASQLAAG GTSPSSYDKY  120
IDFLMQQHND