PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI34783.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family DBB
Protein Properties Length: 135aa    MW: 14532.5 Da    PI: 7.6258
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI34783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box27.28e-092061338
    zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                ++ C+ ++   + lfC++++ +lC +C + +H+       H+
  MCI34783.1 20 PKLCDSCKLTSAALFCRSDSAFLCINCDSRIHSAnklssrHD 61
                578*****999*********************6566777776 PP
2zf-B_box31.24.5e-1062108242
    zf-B_box   2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 
                 + ++C+ +e+ +++  C+ +   lC +C + +H+       H++vp+
  MCI34783.1  62 RVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSAnplarrHERVPV 108
                 5789*****************************66899999*99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MGIERGGLKS FRTSNWSVPP KLCDSCKLTS AALFCRSDSA FLCINCDSRI HSANKLSSRH  60
DRVWMCEVCE QAPASVTCKA DAAALCVTCD SDIHSANPLA RRHERVPVEP FYDSAESVVK  120
SSTAAAAAAA SFNFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.25e-54DBB family protein