PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI34915.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 88aa    MW: 10284.6 Da    PI: 9.5259
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI34915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.83.9e-3127957128
         NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v+++      ++ ++g +ktLvfy grap g +t+Wvmheyrl
  MCI34915.1   2 EWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCEpspfisTEPVIGYRKTLVFYCGRAPLGDRTNWVMHEYRL 79 
                 8*************************************98888877777***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MEWFFFCPRD RKYPNGSRTN RATKAGYWKA TGKDRKVVCE PSPFISTEPV IGYRKTLVFY  60
CGRAPLGDRT NWVMHEYRLN DDPSQGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.17e-42NAC family protein