PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI35001.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

MYB

Protein Properties

Length: 84aa MW: 9716.22 Da PI: 10.3008

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI35001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.1	2.3e-19	3	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l+++v+++G g+W+++ + g+ R++k+c++rw ++l MCI35001.1 3 KGPWTPQEDMILIEYVNKHGEGNWNSVQKNSGLLRCGKSCRLRWANHL 50 79****************************99********9996 PP
2	Myb_DNA-binding	24.5	6.3e-08	56	83	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+++++E++++++++++lG++ W++ a+ MCI35001.1 56 KGSFSEDEEKIIIELHAKLGNK-WARMAA 83 799*****************.9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 84 aa Download sequence
MKKGPWTPQE DMILIEYVNK HGEGNWNSVQ KNSGLLRCGK SCRLRWANHL RPNLKKGSFS 60 EDEEKIIIEL HAKLGNKWAR MAAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	2e-50	MYB family protein