PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI35299.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

SBP

Protein Properties

Length: 103aa MW: 11267 Da PI: 9.1529

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI35299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	72.4	8.1e-23	57	103	1	47
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCs 47 +Cqv+gC++ l +akeyhrrhkvCe+hskap+v+v gleqrfCqqCs MCI35299.1 57 RCQVDGCHVALMNAKEYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCS 103 6*********************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence
MPDPHLTCLK LGKRHYFEDV NGGXXXXXXX XGDKRGKGYC GGGGKVAAAA ASFAVARCQV 60 DGCHVALMNA KEYHRRHKVC EMHSKAPKVV VLGLEQRFCQ QCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	4e-23	SBP family protein