PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI35616.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 100aa    MW: 11134.3 Da    PI: 4.7052
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI35616.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.5e-057999323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                Cp+C+k +s+   L  H++ H
  MCI35616.1 79 CPYCDKKYSTFQALGGHQNAH 99
                *****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MEEHSEPRPE KESKVMSSTS ESNAEDLLNL SLGIQPKSSI KSLEIGEHSS SSQNVVVEPL  60
SQNVDVEPLY EQKVVEFLCP YCDKKYSTFQ ALGGHQNAHK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.14e-08C2H2 family protein