PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI35643.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GATA
Protein Properties Length: 106aa    MW: 11685.4 Da    PI: 8.7623
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI35643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.81.5e-181245134
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  MCI35643.1 12 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 45
                99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
GDQNGSLPVR KCMHCEITKT PQWRAGPMGP KTLCNACGVR YKSGRLFPEY RPAASPTFCP  60
ALHSNSHKKV LEMRVKDIEN SGFESHSAAS PELIPNTNSI LALEYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-45GATA family protein