PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI36818.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

VOZ

Protein Properties

Length: 103aa MW: 10742.2 Da PI: 4.4611

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI36818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	158.6	3.5e-49	19	103	1	85
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaat 85 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llf+alsak+qgk+vgipecegaat MCI36818.1 19 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAAT 103 89*********************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence
YSEEEAIPHI SSYLPSACPP PSAFLGPKCA LWDCPRPAQG LDWCQDYCSS FHAALALNEG 60 PPGMAPVLRP GGIGLKDNLL FSALSAKAQG KDVGIPECEG AAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	7e-57	VOZ family protein