PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI38102.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 126aa    MW: 14085.2 Da    PI: 9.6758
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI38102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS113.62.5e-351126252374
        GRAS 252 sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk....s 346
                 +Fl+r++e+ +yysal+ds+e  l++++++r+k+E+  l+r+++n vaceg++r+er+e ++kWr+r+++aGF   p+s+++++++kl l+  +    +
  MCI38102.1   1 PFLARVAESWSYYSALYDSVEPVLGKDNSDRVKIEEG-LSRKLCNSVACEGRDRVERCEVFGKWRARMSMAGFMLKPMSQNVVESIKLRLAASSnnrvN 98 
                 69***********************************.**************************************************99866531234 PP

        GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
                  g +v+e +g +++gW++r+L+++SaWr
  MCI38102.1  99 TGLSVKEVNGGICFGWMGRTLTVASAWR 126
                 68999**********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
PFLARVAESW SYYSALYDSV EPVLGKDNSD RVKIEEGLSR KLCNSVACEG RDRVERCEVF  60
GKWRARMSMA GFMLKPMSQN VVESIKLRLA ASSNNRVNTG LSVKEVNGGI CFGWMGRTLT  120
VASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.16e-52GRAS family protein