PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI38294.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 126aa    MW: 14509.4 Da    PI: 8.8478
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI38294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.21.2e-13136082128
         NAM  82 yWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                 +W++tgk+++++  +g++ g+kk++v+y+   +  k+ekt+Wv+h+y++
  MCI38294.1  13 RWHKTGKTRPIFL-DGNQRGCKKIMVLYTTpsNGGKAEKTNWVVHQYHI 60 
                 7************.999***********6522666778*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
RRRIFDQDFG ELRWHKTGKT RPIFLDGNQR GCKKIMVLYT TPSNGGKAEK TNWVVHQYHI  60
GREEDEKDGE FVVSKIFYQQ QQPVKSGKKD DQDVPETSEA SIARVVDPVT PNFVTPELPC  120
NKKQCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-46NAC family protein