PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI38396.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 50aa    MW: 5578.47 Da    PI: 10.0379
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI38396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-11535131
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                     +++WT eE++ lv ++k++G g WktI    
       MCI38396.1  5 KLKWTSEEEDALVAGIKKHGAGKWKTILLDP 35
                     789************************8665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    
MGNQKLKWTS EEEDALVAGI KKHGAGKWKT ILLDPQFAPL LTSRSNIDLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.28e-23MYB_related family protein