PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI38500.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

TCP

Protein Properties

Length: 112aa MW: 12288.2 Da PI: 10.3875

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI38500.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.9	6.1e-37	32	99	3	70
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70 ++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+q++pai+e+tgt++ +a MCI38500.1 32 KAKRQSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLEQSEPAIIEATGTGTVPA 99 68999**********************************************************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence
MKEELTETDN HNRQESLAVG VVPMPMTMTV PKAKRQSKDR HTKVEGRGRR IRMPAACAAR 60 IFQLTRELGH KSDGETIRWL LEQSEPAIIE ATGTGTVPAI AVSVGGTLKI PT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-47	TCP family protein