PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCI39431.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LBD

Protein Properties

Length: 99aa MW: 11663.4 Da PI: 9.6337

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCI39431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	61.5	2.2e-19	8	90	17	99
DUF260 17 vlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 la+ f ++p+ f++vhk+FG+s+v+kll++++ ++r++a++slvye ear+r+ v+ + ++++l+++l++++++++ lk+ MCI39431.1 8 ELAQFFSPDNPQLFKVVHKVFGRSTVSKLLRKIDSTQRKKAVDSLVYEVEARLRNHVNDFMDFVHNLEHRLKEVQQKIDNLKS 90 6899*************************************************************************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 99 aa Download sequence
MSCFLVVELA QFFSPDNPQL FKVVHKVFGR STVSKLLRKI DSTQRKKAVD SLVYEVEARL 60 RNHVNDFMDF VHNLEHRLKE VQQKIDNLKS EQTKYLSPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-25	LBD family protein