PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI39594.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 74aa    MW: 7889.75 Da    PI: 4.9019
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI39594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.51.1e-103973135
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevs 35
                rW++qe+l+L+e+r++++ +++++ +k+plW++ s
  MCI39594.1 39 RWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLS 73
                8*******************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
SAAAIATTTT TSASTPTLSG NLEAETTACL GGVDASNGRW PRQETLTLLE IRSRLDPQFK  60
EATQKGPLWD QLSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10000.12e-17Trihelix family protein