PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCI40350.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 96aa    MW: 10934.3 Da    PI: 4.3317
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCI40350.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.59.5e-112469346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT e+d+l+ +a  + + +   +W++Ia+ ++ g++  ++++++ +
       MCI40350.1 24 QWTREDDKLFERALLMVPEDlpnRWEKIAEQVP-GKSVAEVRDHYED 69
                     6*****************99*************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MYQKTIPMAT AAAATTRWPT QPTQWTREDD KLFERALLMV PEDLPNRWEK IAEQVPGKSV  60
AEVRDHYEDL VHDVLEIELG RVEVPSYPDD LAAVSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.14e-21MYB family protein